Restore archived tasks, fix dashboard scroll-reset, bind ornith, add Playwright smoke test

- **Restore 82 completed tasks** from tasks/complete/ back to tasks/ top level (all <7 days old per the cleanup policy; premature bulk archive was fixed). - **Dashboard: fix scroll-reset on auto-refresh** — renderBoard rebuilds the board via innerHTML every 2s, destroying each column-body's scrollTop. Now snapshots column-body scrollTop + board.scrollLeft + view.scrollTop before rebuild and restores after (matched by PHASE_GROUPS index). - **Dashboard UI additions** (pre-existing unstaged work): approval section cards, transition buttons, inline artifact editor (textarea for writing missing SPEC/VERDICT/etc from the detail modal). - **Bind ornith as Implement model** — config.md: Model explicit to omlx/Ornith-1.0-35B-4bit-mlx, context window 32768. Interactive autopilot already used ornith via opencode default; now explicit. - **Fix cleanup stub** — automaton-cleanup.sh had a stale --project arg pointing at a pytest temp dir (test isolation leak). Rewired to point at ~/.automaton. - **Fix plist-isolation test** — test asserted host plist doesn't exist, but a real install creates it. Now snapshots mtime before run, asserts unchanged after (only a write during the test counts as bleed). - **New Playwright smoke test** (tests/test_dashboard_ui.py) — 2 tests: board renders tasks, column scroll survives auto-refresh tick. Verified the test fails without the scroll fix (scrollTop resets to 0). Skipped via importorskip when playwright is absent (main CI stays green). - **Clarify SI loop scope in README** — new-project onboarding section documents the framework-scoped self-improvement loop and options (leave/pause/create project loop). - **CHANGELOG** documents all changes including the known model-divergence gap (mde tasks marked complete but per-role model binding was never implemented).
2026-06-26 10:05:18 -04:00
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+# Bug Report: Project Migration Script
+
+## Methodology
+Reviewed migrate-project.sh and onboarding.md migration section.
+
+## Acceptance Criteria
+| # | Criterion | Result |
+|---|-----------|--------|
+| 1 | migrate-project.sh exists and is executable | ✅ |
+| 2 | Correctly identifies identical vs customized files | ✅ |
+| 3 | Customized files moved to extensions/ | ✅ |
+| 4 | .agent.md and .rules.md preserved | ✅ |
+| 5 | Onboarding detects stale projects | ✅ |
+
+## Findings
+1. **Minor**: Script skips symlinks with `-type f` — unlikely in practice.
+
+## Verdict: PASS
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+# Doc Review: Project Migration Script
+
+## Documents Checked
+| Doc | Status |
+|-----|--------|
+| scripts/migrate-project.sh | ✅ Self-documenting output |
+| prompts/onboarding.md | ✅ Migration Check section |
+| README.md | ✅ Migration path documented |
+
+## Findings
+None.
+
+## Verdict: PASS
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+# Implementation: Project Migration Script
+
+## Summary
+
+Created `scripts/migrate-project.sh` to clean up projects that were set up under the old copy-based model. Also updated `prompts/onboarding.md` to detect stale projects and offer migration.
+
+## Changes Made
+
+### `scripts/migrate-project.sh`
+Shell script that:
+1. Scans `{project}/.automaton/` for files that now live in `~/.automaton/`
+2. Files **identical to global** → deleted (framework provides them)
+3. Files **different from global** → moved to `.automaton/extensions/`
+4. Preserves `.agent.md` and `.rules.md` as-is
+5. Reports what was deleted, moved, and kept
+
+### `prompts/onboarding.md`
+Added "Migration Check" section at the end:
+- During onboarding, checks if project has stale framework file copies
+- Identifies files beyond `.agent.md` and `.rules.md`
+- Offers to run `migrate-project.sh` or provides manual instructions
+
+## Files Created
+- `scripts/migrate-project.sh` — migration shell script (125 lines)
+
+## Files Modified
+- `prompts/onboarding.md` — added migration detection section
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+# Review
+- **Status**: approved
+- **Timestamp**: 2026-06-13T18:04:51.992742
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+# SPEC: Project Migration Script for Additive Extension Model
+
+## Overview
+
+After switching to the additive extension model, existing projects have stale copies of framework files in their `{project}/.automaton/` directories. These need to be cleaned up.
+
+## Context
+
+Under the old model, framework files (prompts, contracts, scripts) were copied into the project's `.automaton/`. Under the new model, the project should only contain `.agent.md`, `.rules.md`, and optionally an `extensions/` directory. Everything else comes from `~/.automaton/`.
+
+## Changes
+
+### 1. `scripts/migrate-project.sh`
+
+Script that takes a project path and:
+1. Scans `{project}/.automaton/` for files that now live in `~/.automaton/`
+2. For each matching file:
+   - **Identical to global** → delete (framework provides them)
+   - **Different from global** → move to `.automaton/extensions/`
+3. Preserves `.agent.md` and `.rules.md` as-is
+4. Reports what was deleted, moved, and kept
+
+### 2. `prompts/onboarding.md`
+
+Add a section at the top that checks if migration is needed:
+- If project has prompt/contract/script copies in `.automaton/`, offer to run migration
+
+## Acceptance Criteria
+
+- [ ] `scripts/migrate-project.sh` exists and is executable
+- [ ] Script correctly identifies identical vs customized files
+- [ ] Customized files are moved to `extensions/`, not deleted
+- [ ] `.agent.md` and `.rules.md` are never touched
+- [ ] Onboarding detects stale projects and offers migration
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+# VERDICT: Project Migration Script
+
+
+## Status: PASS
+## Summary
+Created migrate-project.sh to clean up stale framework file copies from old-model projects. Onboarding detects stale projects and offers migration.
+
+## Phase Results
+| Phase | Result |
+|-------|--------|
+| Implementation | ✅ PASS |
+| Bug Find | ✅ PASS (1 minor finding) |
+| Adversarial Bug Find | ⏭️ Skipped (shell script, no security surface) |
+| Doc Review | ✅ PASS |
+
+## Final Verdict
+**PASS** — All acceptance criteria met. Migration path is clear and safe.