Rename product from agent-framework to automaton; move scripts to scripts/ folder

README.md

@@ -1,4 +1,4 @@
-# Agent Framework
+# Automaton
 
 A contract-based operating system for LLM agents, designed to enforce disciplined engineering workflows.
 
@@ -35,7 +35,7 @@ This will:
 - Check for uncommitted changes and warn you
 - Pull the latest updates
 
-**Upgrading existing projects:** When the framework is updated, existing projects may need their framework files upgraded (new phases added, new prompts, etc.). To upgrade an existing project, tell the agent: "Upgrade the agent-framework for this project." The agent will check for missing files and update them.
+**Upgrading existing projects:** When the framework is updated, existing projects may need their framework files upgraded (new phases added, new prompts, etc.). To upgrade an existing project, tell the agent: "Upgrade automaton for this project." The agent will check for missing files and update them.
 
 ---
 
@@ -46,7 +46,7 @@ Once the framework is installed globally, you must "onboard" every individual pr
 ### Option A: The Agent-Driven Way (Recommended)
 If you want the agent to handle the configuration for you, navigate to your project root and run:
 
-> *"Onboard this project into the agent-framework."*
+> *"Onboard this project into automaton."
 
 The agent will automatically:
 1. Detect your project type (New, Existing, or Upgrade).
@@ -192,7 +192,7 @@ The framework uses a **layered approach** to file management, with a clear prece
 
 When you upgrade the global framework (e.g., after pushing bug fixes), existing projects may need their framework files upgraded. Tell the agent:
 
-> "Upgrade the agent-framework for this project."
+> "Upgrade automaton for this project."
 
 The agent will:
 1. Compare the project's `.automaton/` files with the global `~/.automaton/` files